CDS

Accession Number TCMCG057C01980
gbkey CDS
Protein Id XP_018440922.1
Location complement(join(8561056..8561494,8561579..8562648))
Gene LOC108813000
GeneID 108813000
Organism Raphanus sativus

Protein

Length 502aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018585420.1
Definition PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category J
Description Pseudouridine synthase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K06173        [VIEW IN KEGG]
EC 5.4.99.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000049        [VIEW IN EMBL-EBI]
GO:0000959        [VIEW IN EMBL-EBI]
GO:0000963        [VIEW IN EMBL-EBI]
GO:0001522        [VIEW IN EMBL-EBI]
GO:0002153        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005759        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009982        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016866        [VIEW IN EMBL-EBI]
GO:0031119        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070525        [VIEW IN EMBL-EBI]
GO:0070900        [VIEW IN EMBL-EBI]
GO:0070902        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090646        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140053        [VIEW IN EMBL-EBI]
GO:1900864        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990481        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGACAATCAGGAGCCCGAGATCGAGAAAGCCCCCCAAGAGGAGGAGGCTCCTGATCGCGAACCAGAGCAGAAGAAGCTCAAGATCTCCCCCGCAGGCGACGAAGAACCAGCTTCGTCAGCCGCCGTATCCGCCGCAAACGGCGGCGCCGAGCGAAGACCGCCGAAATACAAACGCCGTAAAGTCGCCATCGCGTTCGCGTTCTGCGGGGTAGGGTACCAGGGGATGCAAAAGAACCCCGGCGCGAAAACCATCGAAGGCGAGCTCGAGGAGGCTCTGTTCCACGCCGGCGCCGTGCCCGAAGCCGATCGGAACAAGCCGAGACAGTACGAGTGGGCTCGGTCGGCTCGAACCGATAAAGGAGTGAGCGCGGTGGGGCAGGTCGTCTCGGGACGATTCTACGTCGACCCGCCCGGGTTCGTGGAGCGGCTGAACTCGAATCTCCCCGATCAGATTCGCGTGTTCGGGTTCAAGCGCGTGGCGCCGTCGTTTAGCGCGAAGAAGTTCTGCGATCGGAGGAGGTATGTGTATCTGATCCCTGTTTTCGCGCTTGATCCGTGCTCGCACAGCGAGGCTGAGATGGCTAGGTCGGATTCAGGGTACGAGTATGTGAAGTGTGTTGAGTGTTGCGAGAAAGGGTATAAGATCCCGCTCGGTGTTTTGGGCAAAGAAAGCGTCGATGATGATGAGGTTCAGTCAGACATTTCGTCGAACACCTGTGGTGCATTAAAGGTTGAGACTTTGAACCCAGAGTCTAAGAGTGAAAGCAAGTTTTTTTGTTATGGAGAGGAGGAGAAGGAGAGGTTGAACAGAATCCTAAGCTGTTACGTTGGTTCACATAACTTCCACAACTTCACCACCAGAACCAAAGCAGCAGACCCGGCTGCGAACCGCTACATTCTCTCCTTCAATGCCAACACTGTGATTACACTCGACGGGAAAGACTTTGTGAAGTGTGAGGTTGTGGGACAGAGCTTCATGCTTCATCAGATAAGGAAAATGATTGGACTTGCTGTTGCTGTCATGAGAAACTATGCGCCTGAATCGGTGATCCAAACCGCTTTCAAGAAGGATGTGAGGATAGTTGTACCGATGGCGCCAGAAGTTGGACTATACCTTGATGAATGCTTCTTCACGTCTTATAACAAAAGGTTTAAAGTCACTCATGAGGAAGTGTCAATGGAAGAATACAAGGAAGTAGCTGAAGAATTCAAGTGGAAGCATGTTTACTCTCATATTGGCTCATCGGAAGAAAAAGATGGGATTGTGGCGATTTGGTTGCATTCACTGAACGAAAGAAACTATCCAGACCTACGTGTTGCTGAACACAAACCAGATGAAGTCATTGTCTATAAGAAGATCGATGCAGCCTCTGAAGAAAAGATCAGTGAAGAGGATGTTGCTGTGAAAGAGAACACAAATGGTGCGGGAGAGCTACTCGTCGACAGTAAGGTAAATGATGAAACCTCTGAAGAAAAGAATATGGGAGAAGAGAAGGCAACCCAGTGA
Protein:  
MDNQEPEIEKAPQEEEAPDREPEQKKLKISPAGDEEPASSAAVSAANGGAERRPPKYKRRKVAIAFAFCGVGYQGMQKNPGAKTIEGELEEALFHAGAVPEADRNKPRQYEWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSNLPDQIRVFGFKRVAPSFSAKKFCDRRRYVYLIPVFALDPCSHSEAEMARSDSGYEYVKCVECCEKGYKIPLGVLGKESVDDDEVQSDISSNTCGALKVETLNPESKSESKFFCYGEEEKERLNRILSCYVGSHNFHNFTTRTKAADPAANRYILSFNANTVITLDGKDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNYAPESVIQTAFKKDVRIVVPMAPEVGLYLDECFFTSYNKRFKVTHEEVSMEEYKEVAEEFKWKHVYSHIGSSEEKDGIVAIWLHSLNERNYPDLRVAEHKPDEVIVYKKIDAASEEKISEEDVAVKENTNGAGELLVDSKVNDETSEEKNMGEEKATQ